Documentation by YARD 0.9.45

Alphabetic Index

File Listing

README

Namespace Listing A-Z

A

Aux (HTS::Bam)

B

Bam (HTS)
BamFileHandle (HTS::Native)
BamIteratorHandle (HTS::Native)
BamRecordHandle (HTS::Native)
BaseMod (HTS::Bam)
BaseModHandle (HTS::Native)
Bcf (HTS)
BcfFileHandle (HTS::Native)
BcfHeaderRecordHandle (HTS::Native)
BcfIteratorHandle (HTS::Native)
BcfRecordHandle (HTS::Native)
BorrowedColumnView (HTS::Bam::Pileup)
BorrowedEntryView (HTS::Bam::Pileup)
BufferState (HTS::Bcf::Format)

C

Cigar (HTS::Bam)
ColumnsView (HTS::Bam::Mpileup)

D

DepthView (HTS::Bam::Mpileup)

E

Error (HTS)
Error (HTS::Bcf)

F

Faidx (HTS)
FieldError (HTS::Bcf)
Flag (HTS::Bam)
Format (HTS::Bcf)
FormatDefinitionError (HTS::Bcf)
FormatError (HTS::Bcf)
FormatReadError (HTS::Bcf)
FormatTypeError (HTS::Bcf)
FormatUpdateError (HTS::Bcf)

G

GenotypeView (HTS::Bcf::Format)

H

HTS
Header (HTS::Bam)
Header (HTS::Bcf)
HeaderError (HTS::Bcf)
HeaderRecord (HTS::Bam)
HeaderRecord (HTS::Bcf)
Hts (HTS)

I

IndexError (HTS::Bcf)
Info (HTS::Bcf)
InfoError (HTS::Bcf)
InfoReadError (HTS::Bcf)
InfoTypeError (HTS::Bcf)
InfoUpdateError (HTS::Bcf)
InvalidBorrowedViewError (HTS::Bcf)

M

MissingIndexError (HTS::Bcf)
Modification (HTS::Bam::BaseMod)
Mpileup (HTS::Bam)
MpileupHandle (HTS::Native)

N

Native (HTS)
NotParsedError (HTS::Bam::BaseMod)
NumericVectorView (HTS::Bcf::Format)

O

OpenError (HTS::Bcf)

P

Pileup (HTS::Bam)
PileupColumn (HTS::Bam::Pileup)
PileupHandle (HTS::Native)
PileupRecord (HTS::Bam::Pileup)
Position (HTS::Bam::BaseMod)

Q

QueryError (HTS::Bcf)

R

Record (HTS::Bam)
Record (HTS::Bcf)

S

SubsetError (HTS::Bcf)

T

Tabix (HTS)

U

UnknownSampleError (HTS::Bcf)
UnsupportedFormatOperationError (HTS::Bcf)
UnsupportedInfoOperationError (HTS::Bcf)