Class: Rafflesia::VariantAnnotationRecord

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/genomes/variant_annotation_record.rb

Constant Summary collapse

HASH_ATTRS = 
{
  source_annotations: :source_annotations,
  variant: :variant,
  warnings: :warnings
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ VariantAnnotationRecord

Returns a new instance of VariantAnnotationRecord.



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# File 'lib/rafflesia/genomes/variant_annotation_record.rb', line 19

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @source_annotations = (hash[:source_annotations] || []).map { |item| item ? Rafflesia::VariantSourceAnnotation.new(item) : nil }
  @variant = hash[:variant] ? Rafflesia::VariantRecord.new(hash[:variant]) : nil
  @warnings = (hash[:warnings] || []).map { |item| item ? Rafflesia::SearchWarning.new(item) : nil }
end

Instance Attribute Details

#source_annotations ⇒ Object

Returns the value of attribute source_annotations.



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# File 'lib/rafflesia/genomes/variant_annotation_record.rb', line 14

def source_annotations
  @source_annotations
end

#variant ⇒ Object

Returns the value of attribute variant.



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# File 'lib/rafflesia/genomes/variant_annotation_record.rb', line 14

def variant
  @variant
end

#warnings ⇒ Object

Returns the value of attribute warnings.



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# File 'lib/rafflesia/genomes/variant_annotation_record.rb', line 14

def warnings
  @warnings
end