Class: Rafflesia::StructurePredictionRequest

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/foundry/structure_prediction_request.rb

Constant Summary collapse

HASH_ATTRS = 
{
  affinity_binder_id: :affinity_binder_id,
  constraints: :constraints,
  entities: :entities,
  idempotency_key: :idempotency_key,
  max_retries: :max_retries,
  max_template_date: :max_template_date,
  metadata: :metadata,
  model: :model,
  model_type: :model_type,
  msa_inputs: :msa_inputs,
  msa_mode: :msa_mode,
  msa_server_url: :msa_server_url,
  num_diffusion_samples: :num_diffusion_samples,
  num_loops: :num_loops,
  num_models: :num_models,
  num_recycles: :num_recycles,
  num_sampling_steps: :num_sampling_steps,
  num_seeds: :num_seeds,
  pair_mode: :pair_mode,
  predict_affinity: :predict_affinity,
  random_seed: :random_seed,
  relax_top_n: :relax_top_n,
  templates: :templates,
  timeout_ms: :timeout_ms
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ StructurePredictionRequest

Returns a new instance of StructurePredictionRequest.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 61

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @affinity_binder_id = hash[:affinity_binder_id]
  @constraints = hash[:constraints]
  @entities = (hash[:entities] || []).map { |item| item ? Rafflesia::StructurePredictionEntity.new(item) : nil }
  @idempotency_key = hash[:idempotency_key]
  @max_retries = hash[:max_retries]
  @max_template_date = hash[:max_template_date]
  @metadata = hash[:metadata] || {}
  @model = hash[:model]
  @model_type = hash[:model_type]
  @msa_inputs = (hash[:msa_inputs] || []).map { |item| item ? Rafflesia::StructurePredictionMsaInput.new(item) : nil }
  @msa_mode = hash[:msa_mode]
  @msa_server_url = hash[:msa_server_url]
  @num_diffusion_samples = hash[:num_diffusion_samples]
  @num_loops = hash[:num_loops]
  @num_models = hash[:num_models]
  @num_recycles = hash[:num_recycles]
  @num_sampling_steps = hash[:num_sampling_steps]
  @num_seeds = hash[:num_seeds]
  @pair_mode = hash[:pair_mode]
  @predict_affinity = hash[:predict_affinity]
  @random_seed = hash[:random_seed]
  @relax_top_n = hash[:relax_top_n]
  @templates = hash[:templates]
  @timeout_ms = hash[:timeout_ms]
end

Instance Attribute Details

#affinity_binder_id ⇒ Object

Returns the value of attribute affinity_binder_id.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def affinity_binder_id
  @affinity_binder_id
end

#constraints ⇒ Object

Returns the value of attribute constraints.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def constraints
  @constraints
end

#entities ⇒ Object

Returns the value of attribute entities.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def entities
  @entities
end

#idempotency_key ⇒ Object

Returns the value of attribute idempotency_key.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def idempotency_key
  @idempotency_key
end

#max_retries ⇒ Object

Returns the value of attribute max_retries.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def max_retries
  @max_retries
end

#max_template_date ⇒ Object

Returns the value of attribute max_template_date.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def max_template_date
  @max_template_date
end

#metadata ⇒ Object

Returns the value of attribute metadata.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def metadata
  @metadata
end

#model ⇒ Object

Returns the value of attribute model.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def model
  @model
end

#model_type ⇒ Object

Returns the value of attribute model_type.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def model_type
  @model_type
end

#msa_inputs ⇒ Object

Returns the value of attribute msa_inputs.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def msa_inputs
  @msa_inputs
end

#msa_mode ⇒ Object

Returns the value of attribute msa_mode.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def msa_mode
  @msa_mode
end

#msa_server_url ⇒ Object

Returns the value of attribute msa_server_url.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def msa_server_url
  @msa_server_url
end

#num_diffusion_samples ⇒ Object

Returns the value of attribute num_diffusion_samples.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def num_diffusion_samples
  @num_diffusion_samples
end

#num_loops ⇒ Object

Returns the value of attribute num_loops.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def num_loops
  @num_loops
end

#num_models ⇒ Object

Returns the value of attribute num_models.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def num_models
  @num_models
end

#num_recycles ⇒ Object

Returns the value of attribute num_recycles.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def num_recycles
  @num_recycles
end

#num_sampling_steps ⇒ Object

Returns the value of attribute num_sampling_steps.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def num_sampling_steps
  @num_sampling_steps
end

#num_seeds ⇒ Object

Returns the value of attribute num_seeds.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def num_seeds
  @num_seeds
end

#pair_mode ⇒ Object

Returns the value of attribute pair_mode.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def pair_mode
  @pair_mode
end

#predict_affinity ⇒ Object

Returns the value of attribute predict_affinity.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def predict_affinity
  @predict_affinity
end

#random_seed ⇒ Object

Returns the value of attribute random_seed.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def random_seed
  @random_seed
end

#relax_top_n ⇒ Object

Returns the value of attribute relax_top_n.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def relax_top_n
  @relax_top_n
end

#templates ⇒ Object

Returns the value of attribute templates.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def templates
  @templates
end

#timeout_ms ⇒ Object

Returns the value of attribute timeout_ms.



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# File 'lib/rafflesia/foundry/structure_prediction_request.rb', line 35

def timeout_ms
  @timeout_ms
end