Class: Rafflesia::SimulationTrajectoryRmsdTableData

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb

Constant Summary collapse

HASH_ATTRS = 
{
  backend: :backend,
  compared_atom_count: :compared_atom_count,
  end_frame: :end_frame,
  frame_count: :frame_count,
  method: :method,
  reference_frame: :reference_frame,
  reference_source: :reference_source,
  reference_structure: :reference_structure,
  relation: :relation,
  row_count: :row_count,
  selected_frame_count: :selected_frame_count,
  selection: :selection,
  start_frame: :start_frame,
  stride: :stride,
  superposed: :superposed,
  topology: :topology,
  trajectory: :trajectory,
  trajectory_id: :trajectory_id,
  trajectory_manifest_object: :trajectory_manifest_object
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ SimulationTrajectoryRmsdTableData

Returns a new instance of SimulationTrajectoryRmsdTableData.



51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 51

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @backend = hash[:backend] ? Rafflesia::SimulationBackendEvidence.new(hash[:backend]) : nil
  @compared_atom_count = hash[:compared_atom_count]
  @end_frame = hash[:end_frame]
  @frame_count = hash[:frame_count]
  @method = hash[:method]
  @reference_frame = hash[:reference_frame]
  @reference_source = hash[:reference_source]
  @reference_structure = hash[:reference_structure] ? Rafflesia::SimulationInputRef.new(hash[:reference_structure]) : nil
  @relation = hash[:relation] ? Rafflesia::RelationArtifactData.new(hash[:relation]) : nil
  @row_count = hash[:row_count]
  @selected_frame_count = hash[:selected_frame_count]
  @selection = hash[:selection]
  @start_frame = hash[:start_frame]
  @stride = hash[:stride]
  @superposed = hash[:superposed]
  @topology = hash[:topology] ? Rafflesia::SimulationInputRef.new(hash[:topology]) : nil
  @trajectory = hash[:trajectory] ? Rafflesia::SimulationInputRef.new(hash[:trajectory]) : nil
  @trajectory_id = hash[:trajectory_id]
  @trajectory_manifest_object = hash[:trajectory_manifest_object] ? Rafflesia::ObjectRef.new(hash[:trajectory_manifest_object]) : nil
end

Instance Attribute Details

#backend ⇒ Object

Returns the value of attribute backend.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def backend
  @backend
end

#compared_atom_count ⇒ Object

Returns the value of attribute compared_atom_count.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def compared_atom_count
  @compared_atom_count
end

#end_frame ⇒ Object

Returns the value of attribute end_frame.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def end_frame
  @end_frame
end

#frame_count ⇒ Object

Returns the value of attribute frame_count.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def frame_count
  @frame_count
end

#method ⇒ Object

Returns the value of attribute method.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def method
  @method
end

#reference_frame ⇒ Object

Returns the value of attribute reference_frame.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def reference_frame
  @reference_frame
end

#reference_source ⇒ Object

Returns the value of attribute reference_source.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def reference_source
  @reference_source
end

#reference_structure ⇒ Object

Returns the value of attribute reference_structure.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def reference_structure
  @reference_structure
end

#relation ⇒ Object

Returns the value of attribute relation.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def relation
  @relation
end

#row_count ⇒ Object

Returns the value of attribute row_count.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def row_count
  @row_count
end

#selected_frame_count ⇒ Object

Returns the value of attribute selected_frame_count.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def selected_frame_count
  @selected_frame_count
end

#selection ⇒ Object

Returns the value of attribute selection.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def selection
  @selection
end

#start_frame ⇒ Object

Returns the value of attribute start_frame.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def start_frame
  @start_frame
end

#stride ⇒ Object

Returns the value of attribute stride.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def stride
  @stride
end

#superposed ⇒ Object

Returns the value of attribute superposed.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def superposed
  @superposed
end

#topology ⇒ Object

Returns the value of attribute topology.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def topology
  @topology
end

#trajectory ⇒ Object

Returns the value of attribute trajectory.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def trajectory
  @trajectory
end

#trajectory_id ⇒ Object

Returns the value of attribute trajectory_id.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def trajectory_id
  @trajectory_id
end

#trajectory_manifest_object ⇒ Object

Returns the value of attribute trajectory_manifest_object.



30
31
32
 
# File 'lib/rafflesia/simulations/simulation_trajectory_rmsd_table_data.rb', line 30

def trajectory_manifest_object
  @trajectory_manifest_object
end