Class: Rafflesia::SimulationNativeContactFractionTableRequest

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb

Constant Summary collapse

HASH_ATTRS = 
{
  backend: :backend,
  database: :database,
  end_frame: :end_frame,
  min_seq_sep: :min_seq_sep,
  output_format: :output_format,
  output_relation: :output_relation,
  partition_by: :partition_by,
  preview_limit: :preview_limit,
  radius_angstrom: :radius_angstrom,
  reference_frame: :reference_frame,
  reference_structure_format: :reference_structure_format,
  reference_structure_object_id: :reference_structure_object_id,
  reference_structure_path: :reference_structure_path,
  relation: :relation,
  release: :release,
  selection: :selection,
  soft_cutoff_factor: :soft_cutoff_factor,
  sort_by: :sort_by,
  start_frame: :start_frame,
  stride: :stride,
  timeout_ms: :timeout_ms,
  topology_format: :topology_format,
  topology_object_id: :topology_object_id,
  topology_path: :topology_path,
  trajectory_format: :trajectory_format,
  trajectory_manifest_object_id: :trajectory_manifest_object_id,
  trajectory_object_id: :trajectory_object_id,
  trajectory_path: :trajectory_path
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ SimulationNativeContactFractionTableRequest

Returns a new instance of SimulationNativeContactFractionTableRequest.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 69

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @backend = hash[:backend]
  @database = hash[:database]
  @end_frame = hash[:end_frame]
  @min_seq_sep = hash[:min_seq_sep]
  @output_format = hash[:output_format]
  @output_relation = hash[:output_relation]
  @partition_by = (hash[:partition_by] || [])
  @preview_limit = hash[:preview_limit]
  @radius_angstrom = hash[:radius_angstrom]
  @reference_frame = hash[:reference_frame]
  @reference_structure_format = hash[:reference_structure_format]
  @reference_structure_object_id = hash[:reference_structure_object_id]
  @reference_structure_path = hash[:reference_structure_path]
  @relation = hash[:relation]
  @release = hash[:release]
  @selection = hash[:selection]
  @soft_cutoff_factor = hash[:soft_cutoff_factor]
  @sort_by = (hash[:sort_by] || [])
  @start_frame = hash[:start_frame]
  @stride = hash[:stride]
  @timeout_ms = hash[:timeout_ms]
  @topology_format = hash[:topology_format]
  @topology_object_id = hash[:topology_object_id]
  @topology_path = hash[:topology_path]
  @trajectory_format = hash[:trajectory_format]
  @trajectory_manifest_object_id = hash[:trajectory_manifest_object_id]
  @trajectory_object_id = hash[:trajectory_object_id]
  @trajectory_path = hash[:trajectory_path]
end

Instance Attribute Details

#backend ⇒ Object

Returns the value of attribute backend.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def backend
  @backend
end

#database ⇒ Object

Returns the value of attribute database.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def database
  @database
end

#end_frame ⇒ Object

Returns the value of attribute end_frame.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def end_frame
  @end_frame
end

#min_seq_sep ⇒ Object

Returns the value of attribute min_seq_sep.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def min_seq_sep
  @min_seq_sep
end

#output_format ⇒ Object

Returns the value of attribute output_format.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def output_format
  @output_format
end

#output_relation ⇒ Object

Returns the value of attribute output_relation.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def output_relation
  @output_relation
end

#partition_by ⇒ Object

Returns the value of attribute partition_by.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def partition_by
  @partition_by
end

#preview_limit ⇒ Object

Returns the value of attribute preview_limit.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def preview_limit
  @preview_limit
end

#radius_angstrom ⇒ Object

Returns the value of attribute radius_angstrom.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def radius_angstrom
  @radius_angstrom
end

#reference_frame ⇒ Object

Returns the value of attribute reference_frame.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def reference_frame
  @reference_frame
end

#reference_structure_format ⇒ Object

Returns the value of attribute reference_structure_format.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def reference_structure_format
  @reference_structure_format
end

#reference_structure_object_id ⇒ Object

Returns the value of attribute reference_structure_object_id.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def reference_structure_object_id
  @reference_structure_object_id
end

#reference_structure_path ⇒ Object

Returns the value of attribute reference_structure_path.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def reference_structure_path
  @reference_structure_path
end

#relation ⇒ Object

Returns the value of attribute relation.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def relation
  @relation
end

#release ⇒ Object

Returns the value of attribute release.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def release
  @release
end

#selection ⇒ Object

Returns the value of attribute selection.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def selection
  @selection
end

#soft_cutoff_factor ⇒ Object

Returns the value of attribute soft_cutoff_factor.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def soft_cutoff_factor
  @soft_cutoff_factor
end

#sort_by ⇒ Object

Returns the value of attribute sort_by.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def sort_by
  @sort_by
end

#start_frame ⇒ Object

Returns the value of attribute start_frame.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def start_frame
  @start_frame
end

#stride ⇒ Object

Returns the value of attribute stride.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def stride
  @stride
end

#timeout_ms ⇒ Object

Returns the value of attribute timeout_ms.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def timeout_ms
  @timeout_ms
end

#topology_format ⇒ Object

Returns the value of attribute topology_format.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def topology_format
  @topology_format
end

#topology_object_id ⇒ Object

Returns the value of attribute topology_object_id.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def topology_object_id
  @topology_object_id
end

#topology_path ⇒ Object

Returns the value of attribute topology_path.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def topology_path
  @topology_path
end

#trajectory_format ⇒ Object

Returns the value of attribute trajectory_format.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def trajectory_format
  @trajectory_format
end

#trajectory_manifest_object_id ⇒ Object

Returns the value of attribute trajectory_manifest_object_id.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def trajectory_manifest_object_id
  @trajectory_manifest_object_id
end

#trajectory_object_id ⇒ Object

Returns the value of attribute trajectory_object_id.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def trajectory_object_id
  @trajectory_object_id
end

#trajectory_path ⇒ Object

Returns the value of attribute trajectory_path.



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# File 'lib/rafflesia/simulations/simulation_native_contact_fraction_table_request.rb', line 39

def trajectory_path
  @trajectory_path
end