Class: Rafflesia::SequenceSeedIndexSegmentPlanData

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb

Constant Summary collapse

HASH_ATTRS = 
{
  directory_object_id: :directory_object_id,
  directory_read: :directory_read,
  fasta_object_id: :fasta_object_id,
  index_id: :index_id,
  indexed_object_bytes: :indexed_object_bytes,
  is_skipped: :is_skipped,
  kmer_size: :kmer_size,
  level: :level,
  manifest_object_id: :manifest_object_id,
  matched_query_token_count: :matched_query_token_count,
  ordinal: :ordinal,
  payload_block_count: :payload_block_count,
  payload_selection: :payload_selection,
  planned_object_bytes: :planned_object_bytes,
  planned_object_read_count: :planned_object_read_count,
  posting_block_count: :posting_block_count,
  posting_reads: :posting_reads,
  segment_id: :segment_id,
  selected_posting_block_count: :selected_posting_block_count,
  selected_posting_count: :selected_posting_count,
  skip_reason: :skip_reason,
  unmatched_query_token_count: :unmatched_query_token_count
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ SequenceSeedIndexSegmentPlanData

Returns a new instance of SequenceSeedIndexSegmentPlanData.



57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 57

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @directory_object_id = hash[:directory_object_id]
  @directory_read = hash[:directory_read] ? Rafflesia::SequenceSeedIndexObjectReadPlan.new(hash[:directory_read]) : nil
  @fasta_object_id = hash[:fasta_object_id]
  @index_id = hash[:index_id]
  @indexed_object_bytes = hash[:indexed_object_bytes]
  @is_skipped = hash[:is_skipped]
  @kmer_size = hash[:kmer_size]
  @level = hash[:level]
  @manifest_object_id = hash[:manifest_object_id]
  @matched_query_token_count = hash[:matched_query_token_count]
  @ordinal = hash[:ordinal]
  @payload_block_count = hash[:payload_block_count]
  @payload_selection = hash[:payload_selection]
  @planned_object_bytes = hash[:planned_object_bytes]
  @planned_object_read_count = hash[:planned_object_read_count]
  @posting_block_count = hash[:posting_block_count]
  @posting_reads = (hash[:posting_reads] || []).map { |item| item ? Rafflesia::SequenceSeedIndexObjectReadPlan.new(item) : nil }
  @segment_id = hash[:segment_id]
  @selected_posting_block_count = hash[:selected_posting_block_count]
  @selected_posting_count = hash[:selected_posting_count]
  @skip_reason = hash[:skip_reason]
  @unmatched_query_token_count = hash[:unmatched_query_token_count]
end

Instance Attribute Details

#directory_object_id ⇒ Object

Returns the value of attribute directory_object_id.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def directory_object_id
  @directory_object_id
end

#directory_read ⇒ Object

Returns the value of attribute directory_read.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def directory_read
  @directory_read
end

#fasta_object_id ⇒ Object

Returns the value of attribute fasta_object_id.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def fasta_object_id
  @fasta_object_id
end

#index_id ⇒ Object

Returns the value of attribute index_id.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def index_id
  @index_id
end

#indexed_object_bytes ⇒ Object

Returns the value of attribute indexed_object_bytes.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def indexed_object_bytes
  @indexed_object_bytes
end

#is_skipped ⇒ Object

Returns the value of attribute is_skipped.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def is_skipped
  @is_skipped
end

#kmer_size ⇒ Object

Returns the value of attribute kmer_size.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def kmer_size
  @kmer_size
end

#level ⇒ Object

Returns the value of attribute level.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def level
  @level
end

#manifest_object_id ⇒ Object

Returns the value of attribute manifest_object_id.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def manifest_object_id
  @manifest_object_id
end

#matched_query_token_count ⇒ Object

Returns the value of attribute matched_query_token_count.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def matched_query_token_count
  @matched_query_token_count
end

#ordinal ⇒ Object

Returns the value of attribute ordinal.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def ordinal
  @ordinal
end

#payload_block_count ⇒ Object

Returns the value of attribute payload_block_count.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def payload_block_count
  @payload_block_count
end

#payload_selection ⇒ Object

Returns the value of attribute payload_selection.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def payload_selection
  @payload_selection
end

#planned_object_bytes ⇒ Object

Returns the value of attribute planned_object_bytes.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def planned_object_bytes
  @planned_object_bytes
end

#planned_object_read_count ⇒ Object

Returns the value of attribute planned_object_read_count.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def planned_object_read_count
  @planned_object_read_count
end

#posting_block_count ⇒ Object

Returns the value of attribute posting_block_count.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def posting_block_count
  @posting_block_count
end

#posting_reads ⇒ Object

Returns the value of attribute posting_reads.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def posting_reads
  @posting_reads
end

#segment_id ⇒ Object

Returns the value of attribute segment_id.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def segment_id
  @segment_id
end

#selected_posting_block_count ⇒ Object

Returns the value of attribute selected_posting_block_count.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def selected_posting_block_count
  @selected_posting_block_count
end

#selected_posting_count ⇒ Object

Returns the value of attribute selected_posting_count.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def selected_posting_count
  @selected_posting_count
end

#skip_reason ⇒ Object

Returns the value of attribute skip_reason.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def skip_reason
  @skip_reason
end

#unmatched_query_token_count ⇒ Object

Returns the value of attribute unmatched_query_token_count.



33
34
35
 
# File 'lib/rafflesia/sequences/sequence_seed_index_segment_plan_data.rb', line 33

def unmatched_query_token_count
  @unmatched_query_token_count
end