Class: Rafflesia::SequenceSeedIndexManifest

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/sequences/sequence_seed_index_manifest.rb

Constant Summary collapse

HASH_ATTRS = 
{
  base_index_id: :base_index_id,
  content_sha256: :content_sha_256,
  created_at: :created_at,
  dataset_name: :dataset_name,
  dataset_version: :dataset_version,
  directory_object: :directory_object,
  distinct_kmer_count: :distinct_kmer_count,
  fasta_object: :fasta_object,
  index_id: :index_id,
  kind: :kind,
  kmer_size: :kmer_size,
  manifest_version: :manifest_version,
  name: :name,
  payload_block_count: :payload_block_count,
  payload_block_size: :payload_block_size,
  payload_lite: :payload_lite,
  posting_block_count: :posting_block_count,
  posting_block_size: :posting_block_size,
  residue_count: :residue_count,
  segment_count: :segment_count,
  segment_id: :segment_id,
  segment_level: :segment_level,
  segment_ordinal: :segment_ordinal,
  segments: :segments,
  sequence_count: :sequence_count,
  sequence_order_sha256: :sequence_order_sha_256,
  source_object: :source_object,
  source_object_id: :source_object_id,
  source_path: :source_path,
  version: :version,
  wal_object_ids: :wal_object_ids,
  wal_record_count: :wal_record_count
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ SequenceSeedIndexManifest

Returns a new instance of SequenceSeedIndexManifest.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 77

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @base_index_id = hash[:base_index_id]
  @content_sha_256 = hash[:content_sha256]
  @created_at = hash[:created_at]
  @dataset_name = hash[:dataset_name]
  @dataset_version = hash[:dataset_version]
  @directory_object = hash[:directory_object] ? Rafflesia::ObjectRef.new(hash[:directory_object]) : nil
  @distinct_kmer_count = hash[:distinct_kmer_count]
  @fasta_object = hash[:fasta_object] ? Rafflesia::ObjectRef.new(hash[:fasta_object]) : nil
  @index_id = hash[:index_id]
  @kind = hash[:kind]
  @kmer_size = hash[:kmer_size]
  @manifest_version = hash[:manifest_version]
  @name = hash[:name]
  @payload_block_count = hash[:payload_block_count]
  @payload_block_size = hash[:payload_block_size]
  @payload_lite = hash[:payload_lite]
  @posting_block_count = hash[:posting_block_count]
  @posting_block_size = hash[:posting_block_size]
  @residue_count = hash[:residue_count]
  @segment_count = hash[:segment_count]
  @segment_id = hash[:segment_id]
  @segment_level = hash[:segment_level]
  @segment_ordinal = hash[:segment_ordinal]
  @segments = (hash[:segments] || []).map { |item| item ? Rafflesia::SequenceSeedIndexSegmentRef.new(item) : nil }
  @sequence_count = hash[:sequence_count]
  @sequence_order_sha_256 = hash[:sequence_order_sha256]
  @source_object = hash[:source_object] ? Rafflesia::ObjectRef.new(hash[:source_object]) : nil
  @source_object_id = hash[:source_object_id]
  @source_path = hash[:source_path]
  @version = hash[:version]
  @wal_object_ids = (hash[:wal_object_ids] || [])
  @wal_record_count = hash[:wal_record_count]
end

Instance Attribute Details

#base_index_id ⇒ Object

Returns the value of attribute base_index_id.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def base_index_id
  @base_index_id
end

#content_sha_256 ⇒ Object

Returns the value of attribute content_sha_256.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def content_sha_256
  @content_sha_256
end

#created_at ⇒ Object

Returns the value of attribute created_at.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def created_at
  @created_at
end

#dataset_name ⇒ Object

Returns the value of attribute dataset_name.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def dataset_name
  @dataset_name
end

#dataset_version ⇒ Object

Returns the value of attribute dataset_version.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def dataset_version
  @dataset_version
end

#directory_object ⇒ Object

Returns the value of attribute directory_object.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def directory_object
  @directory_object
end

#distinct_kmer_count ⇒ Object

Returns the value of attribute distinct_kmer_count.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def distinct_kmer_count
  @distinct_kmer_count
end

#fasta_object ⇒ Object

Returns the value of attribute fasta_object.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def fasta_object
  @fasta_object
end

#index_id ⇒ Object

Returns the value of attribute index_id.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def index_id
  @index_id
end

#kind ⇒ Object

Returns the value of attribute kind.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def kind
  @kind
end

#kmer_size ⇒ Object

Returns the value of attribute kmer_size.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def kmer_size
  @kmer_size
end

#manifest_version ⇒ Object

Returns the value of attribute manifest_version.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def manifest_version
  @manifest_version
end

#name ⇒ Object

Returns the value of attribute name.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def name
  @name
end

#payload_block_count ⇒ Object

Returns the value of attribute payload_block_count.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def payload_block_count
  @payload_block_count
end

#payload_block_size ⇒ Object

Returns the value of attribute payload_block_size.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def payload_block_size
  @payload_block_size
end

#payload_lite ⇒ Object

Returns the value of attribute payload_lite.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def payload_lite
  @payload_lite
end

#posting_block_count ⇒ Object

Returns the value of attribute posting_block_count.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def posting_block_count
  @posting_block_count
end

#posting_block_size ⇒ Object

Returns the value of attribute posting_block_size.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def posting_block_size
  @posting_block_size
end

#residue_count ⇒ Object

Returns the value of attribute residue_count.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def residue_count
  @residue_count
end

#segment_count ⇒ Object

Returns the value of attribute segment_count.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def segment_count
  @segment_count
end

#segment_id ⇒ Object

Returns the value of attribute segment_id.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def segment_id
  @segment_id
end

#segment_level ⇒ Object

Returns the value of attribute segment_level.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def segment_level
  @segment_level
end

#segment_ordinal ⇒ Object

Returns the value of attribute segment_ordinal.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def segment_ordinal
  @segment_ordinal
end

#segments ⇒ Object

Returns the value of attribute segments.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def segments
  @segments
end

#sequence_count ⇒ Object

Returns the value of attribute sequence_count.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def sequence_count
  @sequence_count
end

#sequence_order_sha_256 ⇒ Object

Returns the value of attribute sequence_order_sha_256.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def sequence_order_sha_256
  @sequence_order_sha_256
end

#source_object ⇒ Object

Returns the value of attribute source_object.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def source_object
  @source_object
end

#source_object_id ⇒ Object

Returns the value of attribute source_object_id.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def source_object_id
  @source_object_id
end

#source_path ⇒ Object

Returns the value of attribute source_path.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def source_path
  @source_path
end

#version ⇒ Object

Returns the value of attribute version.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def version
  @version
end

#wal_object_ids ⇒ Object

Returns the value of attribute wal_object_ids.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def wal_object_ids
  @wal_object_ids
end

#wal_record_count ⇒ Object

Returns the value of attribute wal_record_count.



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# File 'lib/rafflesia/sequences/sequence_seed_index_manifest.rb', line 43

def wal_record_count
  @wal_record_count
end