Class: Rafflesia::SequenceSearchRequest

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/sequences/sequence_search_request.rb

Constant Summary collapse

HASH_ATTRS = 
{
  database: :database,
  db: :db,
  kmer_size: :kmer_size,
  max_hits: :max_hits,
  min_identity: :min_identity,
  output_format: :output_format,
  output_relation: :output_relation,
  partition_by: :partition_by,
  preview_limit: :preview_limit,
  query: :query,
  relation: :relation,
  release: :release,
  sort_by: :sort_by
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ SequenceSearchRequest

Returns a new instance of SequenceSearchRequest.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 39

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @database = hash[:database]
  @db = hash[:db]
  @kmer_size = hash[:kmer_size]
  @max_hits = hash[:max_hits]
  @min_identity = hash[:min_identity]
  @output_format = hash[:output_format]
  @output_relation = hash[:output_relation]
  @partition_by = (hash[:partition_by] || [])
  @preview_limit = hash[:preview_limit]
  @query = hash[:query]
  @relation = hash[:relation]
  @release = hash[:release]
  @sort_by = (hash[:sort_by] || [])
end

Instance Attribute Details

#database ⇒ Object

Returns the value of attribute database.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def database
  @database
end

#db ⇒ Object

Returns the value of attribute db.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def db
  @db
end

#kmer_size ⇒ Object

Returns the value of attribute kmer_size.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def kmer_size
  @kmer_size
end

#max_hits ⇒ Object

Returns the value of attribute max_hits.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def max_hits
  @max_hits
end

#min_identity ⇒ Object

Returns the value of attribute min_identity.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def min_identity
  @min_identity
end

#output_format ⇒ Object

Returns the value of attribute output_format.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def output_format
  @output_format
end

#output_relation ⇒ Object

Returns the value of attribute output_relation.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def output_relation
  @output_relation
end

#partition_by ⇒ Object

Returns the value of attribute partition_by.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def partition_by
  @partition_by
end

#preview_limit ⇒ Object

Returns the value of attribute preview_limit.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def preview_limit
  @preview_limit
end

#query ⇒ Object

Returns the value of attribute query.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def query
  @query
end

#relation ⇒ Object

Returns the value of attribute relation.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def relation
  @relation
end

#release ⇒ Object

Returns the value of attribute release.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def release
  @release
end

#sort_by ⇒ Object

Returns the value of attribute sort_by.



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# File 'lib/rafflesia/sequences/sequence_search_request.rb', line 24

def sort_by
  @sort_by
end