Class: Rafflesia::MapModelFitScoreData

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/maps/map_model_fit_score_data.rb

Constant Summary collapse

HASH_ATTRS = 
{
  atom_above_threshold_count: :atom_above_threshold_count,
  atom_above_threshold_fraction: :atom_above_threshold_fraction,
  atom_count: :atom_count,
  atom_in_map_bounds_count: :atom_in_map_bounds_count,
  atom_in_map_bounds_fraction: :atom_in_map_bounds_fraction,
  created_at: :created_at,
  density_sampled_atom_count: :density_sampled_atom_count,
  density_threshold: :density_threshold,
  density_threshold_source: :density_threshold_source,
  fit_id: :fit_id,
  is_density_sampled: :is_density_sampled,
  is_map_bounds_measured: :is_map_bounds_measured,
  map_bounds: :map_bounds,
  map_format: :map_format,
  map_id: :map_id,
  max_sampled_density: :max_sampled_density,
  mean_sampled_density: :mean_sampled_density,
  mean_sampled_density_z: :mean_sampled_density_z,
  metadata: :metadata,
  method: :method,
  min_sampled_density: :min_sampled_density,
  residue_count: :residue_count,
  residue_in_map_bounds_count: :residue_in_map_bounds_count,
  residue_in_map_bounds_fraction: :residue_in_map_bounds_fraction,
  structure_bounds: :structure_bounds,
  structure_id: :structure_id
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ MapModelFitScoreData

Returns a new instance of MapModelFitScoreData.



65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 65

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @atom_above_threshold_count = hash[:atom_above_threshold_count]
  @atom_above_threshold_fraction = hash[:atom_above_threshold_fraction]
  @atom_count = hash[:atom_count]
  @atom_in_map_bounds_count = hash[:atom_in_map_bounds_count]
  @atom_in_map_bounds_fraction = hash[:atom_in_map_bounds_fraction]
  @created_at = hash[:created_at]
  @density_sampled_atom_count = hash[:density_sampled_atom_count]
  @density_threshold = hash[:density_threshold]
  @density_threshold_source = hash[:density_threshold_source]
  @fit_id = hash[:fit_id]
  @is_density_sampled = hash[:is_density_sampled]
  @is_map_bounds_measured = hash[:is_map_bounds_measured]
  @map_bounds = hash[:map_bounds] ? Rafflesia::CartesianBounds.new(hash[:map_bounds]) : nil
  @map_format = hash[:map_format]
  @map_id = hash[:map_id]
  @max_sampled_density = hash[:max_sampled_density]
  @mean_sampled_density = hash[:mean_sampled_density]
  @mean_sampled_density_z = hash[:mean_sampled_density_z]
  @metadata = hash[:metadata] || {}
  @method = hash[:method]
  @min_sampled_density = hash[:min_sampled_density]
  @residue_count = hash[:residue_count]
  @residue_in_map_bounds_count = hash[:residue_in_map_bounds_count]
  @residue_in_map_bounds_fraction = hash[:residue_in_map_bounds_fraction]
  @structure_bounds = hash[:structure_bounds] ? Rafflesia::CartesianBounds.new(hash[:structure_bounds]) : nil
  @structure_id = hash[:structure_id]
end

Instance Attribute Details

#atom_above_threshold_count ⇒ Object

Returns the value of attribute atom_above_threshold_count.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def atom_above_threshold_count
  @atom_above_threshold_count
end

#atom_above_threshold_fraction ⇒ Object

Returns the value of attribute atom_above_threshold_fraction.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def atom_above_threshold_fraction
  @atom_above_threshold_fraction
end

#atom_count ⇒ Object

Returns the value of attribute atom_count.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def atom_count
  @atom_count
end

#atom_in_map_bounds_count ⇒ Object

Returns the value of attribute atom_in_map_bounds_count.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def atom_in_map_bounds_count
  @atom_in_map_bounds_count
end

#atom_in_map_bounds_fraction ⇒ Object

Returns the value of attribute atom_in_map_bounds_fraction.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def atom_in_map_bounds_fraction
  @atom_in_map_bounds_fraction
end

#created_at ⇒ Object

Returns the value of attribute created_at.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def created_at
  @created_at
end

#density_sampled_atom_count ⇒ Object

Returns the value of attribute density_sampled_atom_count.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def density_sampled_atom_count
  @density_sampled_atom_count
end

#density_threshold ⇒ Object

Returns the value of attribute density_threshold.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def density_threshold
  @density_threshold
end

#density_threshold_source ⇒ Object

Returns the value of attribute density_threshold_source.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def density_threshold_source
  @density_threshold_source
end

#fit_id ⇒ Object

Returns the value of attribute fit_id.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def fit_id
  @fit_id
end

#is_density_sampled ⇒ Object

Returns the value of attribute is_density_sampled.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def is_density_sampled
  @is_density_sampled
end

#is_map_bounds_measured ⇒ Object

Returns the value of attribute is_map_bounds_measured.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def is_map_bounds_measured
  @is_map_bounds_measured
end

#map_bounds ⇒ Object

Returns the value of attribute map_bounds.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def map_bounds
  @map_bounds
end

#map_format ⇒ Object

Returns the value of attribute map_format.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def map_format
  @map_format
end

#map_id ⇒ Object

Returns the value of attribute map_id.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def map_id
  @map_id
end

#max_sampled_density ⇒ Object

Returns the value of attribute max_sampled_density.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def max_sampled_density
  @max_sampled_density
end

#mean_sampled_density ⇒ Object

Returns the value of attribute mean_sampled_density.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def mean_sampled_density
  @mean_sampled_density
end

#mean_sampled_density_z ⇒ Object

Returns the value of attribute mean_sampled_density_z.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def mean_sampled_density_z
  @mean_sampled_density_z
end

#metadata ⇒ Object

Returns the value of attribute metadata.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def metadata
  @metadata
end

#method ⇒ Object

Returns the value of attribute method.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def method
  @method
end

#min_sampled_density ⇒ Object

Returns the value of attribute min_sampled_density.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def min_sampled_density
  @min_sampled_density
end

#residue_count ⇒ Object

Returns the value of attribute residue_count.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def residue_count
  @residue_count
end

#residue_in_map_bounds_count ⇒ Object

Returns the value of attribute residue_in_map_bounds_count.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def residue_in_map_bounds_count
  @residue_in_map_bounds_count
end

#residue_in_map_bounds_fraction ⇒ Object

Returns the value of attribute residue_in_map_bounds_fraction.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def residue_in_map_bounds_fraction
  @residue_in_map_bounds_fraction
end

#structure_bounds ⇒ Object

Returns the value of attribute structure_bounds.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def structure_bounds
  @structure_bounds
end

#structure_id ⇒ Object

Returns the value of attribute structure_id.



37
38
39
 
# File 'lib/rafflesia/maps/map_model_fit_score_data.rb', line 37

def structure_id
  @structure_id
end