Class: Rafflesia::DisulfideBondRecord

Inherits:
Types::BaseModel
  • Object
show all
Defined in:
lib/rafflesia/proteins/disulfide_bond_record.rb

Constant Summary collapse

HASH_ATTRS = 
{
  ca_distance_angstrom: :ca_distance_angstrom,
  chi1_a_degrees: :chi_1_a_degrees,
  chi1_b_degrees: :chi_1_b_degrees,
  chi2_a_degrees: :chi_2_a_degrees,
  chi2_b_degrees: :chi_2_b_degrees,
  chi3_degrees: :chi_3_degrees,
  configuration: :configuration,
  cys_a: :cys_a,
  cys_b: :cys_b,
  same_chain: :same_chain,
  sg_distance_angstrom: :sg_distance_angstrom
}.freeze

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(json) ⇒ DisulfideBondRecord

Returns a new instance of DisulfideBondRecord.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 35

def initialize(json)
  super()
  hash = self.class.normalize(json)
  @ca_distance_angstrom = hash[:ca_distance_angstrom]
  @chi_1_a_degrees = hash[:chi1_a_degrees]
  @chi_1_b_degrees = hash[:chi1_b_degrees]
  @chi_2_a_degrees = hash[:chi2_a_degrees]
  @chi_2_b_degrees = hash[:chi2_b_degrees]
  @chi_3_degrees = hash[:chi3_degrees]
  @configuration = hash[:configuration]
  @cys_a = hash[:cys_a] ? Rafflesia::ResiduePointer.new(hash[:cys_a]) : nil
  @cys_b = hash[:cys_b] ? Rafflesia::ResiduePointer.new(hash[:cys_b]) : nil
  @same_chain = hash[:same_chain]
  @sg_distance_angstrom = hash[:sg_distance_angstrom]
end

Instance Attribute Details

#ca_distance_angstrom ⇒ Object

Returns the value of attribute ca_distance_angstrom.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def ca_distance_angstrom
  @ca_distance_angstrom
end

#chi_1_a_degrees ⇒ Object

Returns the value of attribute chi_1_a_degrees.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def chi_1_a_degrees
  @chi_1_a_degrees
end

#chi_1_b_degrees ⇒ Object

Returns the value of attribute chi_1_b_degrees.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def chi_1_b_degrees
  @chi_1_b_degrees
end

#chi_2_a_degrees ⇒ Object

Returns the value of attribute chi_2_a_degrees.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def chi_2_a_degrees
  @chi_2_a_degrees
end

#chi_2_b_degrees ⇒ Object

Returns the value of attribute chi_2_b_degrees.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def chi_2_b_degrees
  @chi_2_b_degrees
end

#chi_3_degrees ⇒ Object

Returns the value of attribute chi_3_degrees.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def chi_3_degrees
  @chi_3_degrees
end

#configuration ⇒ Object

Returns the value of attribute configuration.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def configuration
  @configuration
end

#cys_a ⇒ Object

Returns the value of attribute cys_a.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def cys_a
  @cys_a
end

#cys_b ⇒ Object

Returns the value of attribute cys_b.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def cys_b
  @cys_b
end

#same_chain ⇒ Object

Returns the value of attribute same_chain.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def same_chain
  @same_chain
end

#sg_distance_angstrom ⇒ Object

Returns the value of attribute sg_distance_angstrom.



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# File 'lib/rafflesia/proteins/disulfide_bond_record.rb', line 22

def sg_distance_angstrom
  @sg_distance_angstrom
end