Module: R::Support
- Defined in:
- lib/R_interface/rsupport.rb,
lib/R_interface/r_methods.rb,
lib/R_interface/rsupport_scope.rb
Defined Under Namespace
Classes: BatchCollector
Constant Summary collapse
- DISPATCH_PROBE_CACHE_MAX =
Phase 3: cache bridge dispatch_probe(handle, name) → { is_field, is_func } (FIFO eviction).
4096- TRANSPORT_NL =
"\uE000".freeze
- MAX_UNBOX_DEPTH =
Maximum recursion depth when unboxing lists. Beyond this we raise UnboxDepthError.
100- MD_INDEX_BACKTICK =
'`[`'.freeze
- MD_ASSIGN_BACKTICK =
'`[<-`'.freeze
- @@var_id =
0- @@var_id_mutex =
Mutex.new
Class Attribute Summary collapse
-
.dispatch_probe_cache_hits ⇒ Object
readonly
Returns the value of attribute dispatch_probe_cache_hits.
-
.dispatch_probe_cache_misses ⇒ Object
readonly
Returns the value of attribute dispatch_probe_cache_misses.
Class Method Summary collapse
- .batch_eval_with_result(assignment_codes) ⇒ Object
-
.build_subscript_assign_do_call_alist(receiver, kw_hash) ⇒ Object
[<-with i/j = :all (R::DataFrame#[]=). Same tidyselect / anyNA issues with missing_arg().. -
.build_subscript_do_call_alist(all_args) ⇒ Object
R
[with a true missing dimension (Ruby :all). tidyselect on tbl_df rejectsmissing_arg()results as subscripts ("empty string"); alist(, ) is real missing.. -
.capture ⇒ Object
Galaaz 2.0: In the Shadow Bridge, these methods return the name of the R function as a string handle.
- .capture2 ⇒ Object
- .clear_dispatch_probe_handle_cache! ⇒ Object
-
.convert_symbol2r(symbol) ⇒ Object
Convert a Ruby method name to the R name: __ => ., ___ => ::, rclass => class, eql => ==.
- .create_bin_expr(operator) ⇒ Object
- .dbk_index ⇒ Object
- .dispatch_probe_cache_key(handle, name) ⇒ Object
- .dispatch_probe_handle_cache_size ⇒ Object
- .enquo ⇒ Object
-
.eval(string) ⇒ Object
Evaluate an R expression (string, Language, or handle).
-
.exec_function(function, *args, unbox: false, **kwargs) ⇒ Object
(also: exec_function_name)
Run an R call: f_name(args...).
-
.exec_function_async(function, *args, unbox: false, timeout: nil, **kwargs, &block) ⇒ Object
Async variant of
exec_function;blockreceivesNewBridge::EvalResult(+#value+ is likeexec_functionreturn). -
.expression_display_arg(arg) ⇒ Object
String suitable for expression display (to_s).
-
.generate_var_name ⇒ Object
Generate a unique R-side variable name (e.g. g2_v1, g2_v2) for assignment results.
-
.get_callback(id) ⇒ Object
Retrieve the Ruby proc registered for a callback id (from --G_CALLBACK--id--...).
-
.get_deparse_string(arg) ⇒ Object
R-side deparse of an R::Object to a single string (e.g. "c(1L, 2L, 3L, 4L)").
-
.get_ruby_object(id_str) ⇒ Object
Retrieve the Ruby object for a handle "rb_obj_
" returned from R. - .md_index ⇒ Object
- .new_scope(symbol, *args, &block) ⇒ Object
-
.parse_arg(arg) ⇒ Object
Turn a Ruby value into an R code fragment (string): handles, scalars, hashes -> list(), arrays -> c(), Procs -> R callback stub, etc.
-
.process_missing(symbol, internal, *args) ⇒ Object
Entry point for method_missing: handle setters (x=), eval, or dispatch to R (function / field / method with receiver).
-
.process_missing_dispatch(name, internal, args) ⇒ Object
Dispatch: R module (eval handle/namespace or exec_function) or R::Object (length / function / field / fallback).
-
.process_missing_eval(name, internal, args) ⇒ Object
Handle obj.eval(env) or R.eval(code): expression in context, or single-arg R.eval.
-
.process_missing_setter(name, internal, args) ⇒ Object
Handle obj.var = rhs or R.var = rhs: use
var<-or$<-on R::Object, else .GlobalEnv assignment. - .range ⇒ Object
-
.register_callback(proc) ⇒ Object
Register a Proc/Method to be invoked from R (e.g. in outer()); returns callback id for the R stub.
-
.register_ruby_object(obj) ⇒ Object
Store a Ruby object for passing to R; returns handle string "rb_obj_
" for use in R. - .reset_dispatch_probe_cache_stats! ⇒ Object
- .ruby_callback_method ⇒ Object
-
.ruby_result_from_envelope(envelope, var_name, r_expr) ⇒ Object
Build the same Ruby value as
exec_functionfrom a legacy envelope (+:handle+, scalars,rb_obj_*). - .start_capture ⇒ Object
- .stop_capture ⇒ Object
- .store_dispatch_probe_handle_cache(key, is_field, is_func) ⇒ Object
Class Attribute Details
.dispatch_probe_cache_hits ⇒ Object (readonly)
Returns the value of attribute dispatch_probe_cache_hits.
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# File 'lib/R_interface/rsupport.rb', line 43 def dispatch_probe_cache_hits @dispatch_probe_cache_hits end |
.dispatch_probe_cache_misses ⇒ Object (readonly)
Returns the value of attribute dispatch_probe_cache_misses.
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# File 'lib/R_interface/rsupport.rb', line 43 def dispatch_probe_cache_misses @dispatch_probe_cache_misses end |
Class Method Details
.batch_eval_with_result(assignment_codes) ⇒ Object
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# File 'lib/R_interface/rsupport.rb', line 670 def self.batch_eval_with_result(assignment_codes) R.bridge.batch_eval_r_with_result(Array(assignment_codes)) end |
.build_subscript_assign_do_call_alist(receiver, kw_hash) ⇒ Object
[<- with i/j = :all (R::DataFrame#[]=). Same tidyselect / anyNA issues with missing_arg().
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# File 'lib/R_interface/rsupport.rb', line 305 def self.build_subscript_assign_do_call_alist(receiver, kw_hash) pairs = kw_hash.map do |k, v| key = k.to_s.gsub(/__/, ".") key_r = (key =~ /\A[a-zA-Z._][a-zA-Z0-9._]*\z/) ? key : "`#{key.gsub('`', '\\`')}`" if v.is_a?(::Symbol) && v == :all "#{key_r} = " else "#{key_r} = #{parse_arg(v)}" end end inner = [parse_arg(receiver), *pairs].join(", ") "do.call(`[<-`, alist(#{inner}))" end |
.build_subscript_do_call_alist(all_args) ⇒ Object
R [ with a true missing dimension (Ruby :all). tidyselect on tbl_df rejects
missing_arg() results as subscripts ("empty string"); alist(, ) is real missing.
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# File 'lib/R_interface/rsupport.rb', line 296 def self.build_subscript_do_call_alist(all_args) inner = all_args.map do |arg| (arg.is_a?(::Symbol) && arg == :all) ? nil : parse_arg(arg) end inner = inner.map { |frag| frag.nil? ? '' : frag }.join(', ') "do.call(`[`, alist(#{inner}))" end |
.capture ⇒ Object
Galaaz 2.0: In the Shadow Bridge, these methods return the name of the R function as a string handle.
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# File 'lib/R_interface/r_methods.rb', line 31 def self.capture "capture" # Requires capture to be defined in R end |
.capture2 ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 35 def self.capture2 "capture2" end |
.clear_dispatch_probe_handle_cache! ⇒ Object
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# File 'lib/R_interface/rsupport.rb', line 57 def self.clear_dispatch_probe_handle_cache! @dispatch_probe_cache_mx.synchronize do @dispatch_probe_handle_cache.clear @dispatch_probe_handle_fifo.clear end end |
.convert_symbol2r(symbol) ⇒ Object
Convert a Ruby method name to the R name: __ => ., ___ => ::, rclass => class, eql => ==.
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# File 'lib/R_interface/rsupport.rb', line 92 def self.convert_symbol2r(symbol) name = symbol.to_s name.gsub!(/___/, "::") name.gsub!(/__/, ".") case name when "rclass" then "class" when "eql" then "==" else name end end |
.create_bin_expr(operator) ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 67 def self.create_bin_expr(operator) "function(op1, op2) { #{operator}(op1, op2) }" end |
.dbk_index ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 47 def self.dbk_index "`[[`" end |
.dispatch_probe_cache_key(handle, name) ⇒ Object
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# File 'lib/R_interface/rsupport.rb', line 64 def self.dispatch_probe_cache_key(handle, name) "#{handle}\u0000#{name}" end |
.dispatch_probe_handle_cache_size ⇒ Object
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# File 'lib/R_interface/rsupport.rb', line 53 def self.dispatch_probe_handle_cache_size @dispatch_probe_cache_mx.synchronize { @dispatch_probe_handle_cache.size } end |
.enquo ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 59 def self.enquo "enquo" end |
.eval(string) ⇒ Object
Evaluate an R expression (string, Language, or handle). Returns a scalar value or R::Object.build(...). Uses .expression or .r_interop when present so we never treat R's printed output as code.
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# File 'lib/R_interface/rsupport.rb', line 105 def self.eval(string) puts "DEBUG: Support.eval(#{string.inspect})" if ENV['GALAAZ_DEBUG'] var_name = self.generate_var_name r_code = if string.respond_to?(:expression) && string.expression string.expression.to_s elsif string.respond_to?(:r_interop) && string.r_interop.is_a?(::String) && string.r_interop.start_with?("g2_v") string.r_interop else string.to_s end # Determine if we need to wrap in braces or use eval() # If it's a handle, we MUST use eval() in R to get its value if it's a symbol final_r_code = if r_code.start_with?("g2_v") "eval(#{r_code})" elsif r_code.include?("\n") && !r_code.strip.start_with?("{") && !r_code.include?("<-") && !r_code.include?("=") "{#{r_code}\n}" else r_code end assignment = "#{var_name} <- { #{final_r_code}\n }" envelope = R.bridge.eval_r_with_result(assignment) if ENV['GALAAZ_DEBUG'] puts "DEBUG: eval envelope=#{envelope.inspect}" end raise "Result protocol: no envelope (buffer missing or invalid)" unless envelope case envelope[:type] when :scalar_double, :scalar_integer, :scalar_logical return envelope[:value] when :scalar_character return R::Object.build(var_name, nil, r_class: "character") when :scalar_symbol sym_name = envelope[:value].to_s return sym_name.gsub("::", "___").gsub(".", "__").to_sym when :handle # Protocol spec: eval returns scalar symbol as Ruby Symbol. R sends symbol/name as handle (type 4); unbox here only. r_class = envelope[:r_class].to_s.strip if r_class == "name" || r_class == "symbol" raw = R.bridge.eval_r("as.character(#{envelope[:handle]})").to_s m = raw.match(/\[1\]\s*"([^"]*)"/) name = m ? m[1] : raw.strip return name.gsub("::", "___").gsub(".", "__").to_sym end return R::Object.build(envelope[:handle], nil, r_class: envelope[:r_class], wrapper_tag: envelope[:wrapper_tag]) else raise "Result protocol: unknown envelope type #{envelope[:type].inspect}" end end |
.exec_function(function, *args, unbox: false, **kwargs) ⇒ Object Also known as: exec_function_name
Run an R call: f_name(args...). Builds assignment, gets envelope from bridge, returns R::Object (boxed).
Unbox with .to_ruby, .unboxed_get(0), or >> 0. kwargs (e.g. i:, value:) are merged into args for R named-argument calls like [[<-(df, i=..., value=...).
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# File 'lib/R_interface/rsupport.rb', line 324 def self.exec_function(function, *args, unbox: false, **kwargs) f_name = function.respond_to?(:r_interop) ? function.r_interop : function if args.empty? && kwargs.empty? && (f_name.include?("::") || f_name.start_with?("g2_v")) return self.eval(f_name) end var_name = self.generate_var_name all_args = kwargs.empty? ? args : args + [kwargs] use_subscript_alist = kwargs.empty? && f_name == MD_INDEX_BACKTICK && all_args.any? { |a| a.is_a?(::Symbol) && a == :all } && !all_args.any? { |a| a.is_a?(Hash) } use_assign_alist = !kwargs.empty? && f_name == MD_ASSIGN_BACKTICK && all_args.size == 2 && all_args[1].is_a?(Hash) && all_args[1].values.any? { |v| v.is_a?(::Symbol) && v == :all } if use_subscript_alist r_expr = build_subscript_do_call_alist(all_args) elsif use_assign_alist r_expr = build_subscript_assign_do_call_alist(all_args[0], all_args[1]) else r_args = all_args.map { |arg| self.parse_arg(arg) } # eval(expr, envir): R expects expr as expression; parse_arg on Language returns bare string -> wrap in parse(text=...) so envir is used if f_name == "eval" && args.size == 2 && !r_args[0].to_s.start_with?("g2_v", "quote(") r_args[0] = "parse(text=#{r_args[0].to_s.inspect})" end r_expr = "#{f_name}(#{r_args.join(", ")})" end assignment = "#{var_name} <- #{r_expr}" envelope = R.bridge.eval_r_with_result(assignment) unless envelope reason = R.bridge.respond_to?(:last_envelope_nil_reason) && R.bridge.last_envelope_nil_reason raise "Result protocol: no envelope (buffer missing or invalid)#{reason ? " [#{reason}]" : ''}" end ruby_result_from_envelope(envelope, var_name, r_expr) end |
.exec_function_async(function, *args, unbox: false, timeout: nil, **kwargs, &block) ⇒ Object
Async variant of exec_function; block receives NewBridge::EvalResult (+#value+ is like exec_function return).
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# File 'lib/R_interface/rsupport.rb', line 391 def self.exec_function_async(function, *args, unbox: false, timeout: nil, **kwargs, &block) raise ArgumentError, 'exec_function_async requires a block' unless block f_name = function.respond_to?(:r_interop) ? function.r_interop : function if args.empty? && kwargs.empty? && (f_name.include?("::") || f_name.start_with?("g2_v")) raise ArgumentError, 'exec_function_async does not support bare handle/namespace reference; use R.eval_r_async' end var_name = self.generate_var_name all_args = kwargs.empty? ? args : args + [kwargs] use_subscript_alist = kwargs.empty? && f_name == MD_INDEX_BACKTICK && all_args.any? { |a| a.is_a?(::Symbol) && a == :all } && !all_args.any? { |a| a.is_a?(Hash) } use_assign_alist = !kwargs.empty? && f_name == MD_ASSIGN_BACKTICK && all_args.size == 2 && all_args[1].is_a?(Hash) && all_args[1].values.any? { |v| v.is_a?(::Symbol) && v == :all } if use_subscript_alist r_expr = build_subscript_do_call_alist(all_args) elsif use_assign_alist r_expr = build_subscript_assign_do_call_alist(all_args[0], all_args[1]) else r_args = all_args.map { |arg| self.parse_arg(arg) } if f_name == "eval" && args.size == 2 && !r_args[0].to_s.start_with?("g2_v", "quote(") r_args[0] = "parse(text=#{r_args[0].to_s.inspect})" end r_expr = "#{f_name}(#{r_args.join(", ")})" end assignment = "#{var_name} <- #{r_expr}" R.bridge.eval_r_with_result_async(assignment, timeout: timeout) do |result| if result.ok? begin env = result.value[:envelope] vn = result.value[:var_name] rx = result.value[:r_expr] obj = ruby_result_from_envelope(env, vn, rx) block.call(NewBridge::EvalResult.success(obj)) rescue StandardError => e block.call(NewBridge::EvalResult.failure(e)) end else block.call(result) end end end |
.expression_display_arg(arg) ⇒ Object
String suitable for expression display (to_s). For R::Language use stored expression; for other R::Object use R's deparse() so display reflects the current value (not the creating R code stored in .expression).
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# File 'lib/R_interface/rsupport.rb', line 159 def self.expression_display_arg(arg) puts "DEBUG expression_display_arg: arg=#{arg.inspect} class=#{arg.class}" if ENV["GALAAZ_DEBUG"] return arg.expression if arg.is_a?(R::Language) && arg.respond_to?(:expression) && arg.expression return self.get_deparse_string(arg) if arg.is_a?(R::Object) self.parse_arg(arg).to_s end |
.generate_var_name ⇒ Object
Generate a unique R-side variable name (e.g. g2_v1, g2_v2) for assignment results.
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# File 'lib/R_interface/rsupport.rb', line 84 def self.generate_var_name @@var_id_mutex.synchronize do @@var_id += 1 "g2_v#{@@var_id}" end end |
.get_callback(id) ⇒ Object
Retrieve the Ruby proc registered for a callback id (from --G_CALLBACK--id--...).
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# File 'lib/R_interface/rsupport.rb', line 646 def self.get_callback(id) @callbacks[id.to_i] end |
.get_deparse_string(arg) ⇒ Object
R-side deparse of an R::Object to a single string (e.g. "c(1L, 2L, 3L, 4L)"). Relies on R evaluating deparse() correctly on the object.
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# File 'lib/R_interface/rsupport.rb', line 168 def self.get_deparse_string(arg) puts "DEBUG get_deparse_string: called for #{arg.r_interop.inspect}" if ENV["GALAAZ_DEBUG"] dep = self.exec_function("deparse", arg) puts "DEBUG get_deparse_string: deparse result class=#{dep.class} value=#{dep.inspect}" if ENV["GALAAZ_DEBUG"] str = self.exec_function("paste0", dep, { collapse: "" }) return str.to_s if str.is_a?(::String) raw = R.bridge.eval_r("paste0(#{str.r_interop}, collapse='')").to_s puts "DEBUG get_deparse_string: eval_r paste0 raw=#{raw.inspect}" if ENV["GALAAZ_DEBUG"] m = raw.match(/\[1\]\s*"([^"]*)"/) result = m ? m[1] : raw.strip puts "DEBUG get_deparse_string: returning #{result.inspect}" if ENV["GALAAZ_DEBUG"] result end |
.get_ruby_object(id_str) ⇒ Object
Retrieve the Ruby object for a handle "rb_obj_
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# File 'lib/R_interface/rsupport.rb', line 651 def self.get_ruby_object(id_str) id = id_str.sub("rb_obj_", "").to_i @ruby_objects[id] end |
.md_index ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 51 def self.md_index "`[`" end |
.new_scope(symbol, *args, &block) ⇒ Object
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# File 'lib/R_interface/rsupport_scope.rb', line 69 def self.new_scope(symbol, *args, &block) executionScope = Scope.with(symbol, *args) scope = executionScope.new scope.instance_eval(&block) # scope end |
.parse_arg(arg) ⇒ Object
Turn a Ruby value into an R code fragment (string): handles, scalars, hashes -> list(), arrays -> c(), Procs -> R callback stub, etc.
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# File 'lib/R_interface/rsupport.rb', line 183 def self.parse_arg(arg) return arg.r_interop if arg.respond_to?(:r_interop) && arg.r_interop return arg.expression if arg.respond_to?(:expression) && arg.expression case arg when Hash arg.map do |k, v| key = k.to_s.gsub(/__/, ".") # R list names with spaces or special chars must be backtick-quoted key_r = (key =~ /\A[a-zA-Z._][a-zA-Z0-9._]*\z/) ? key : "`#{key.gsub('`', '\\`')}`" "#{key_r} = #{self.parse_arg(v)}" end.join(", ") when Array "c(#{arg.map { |v| self.parse_arg(v) }.join(", ")})" when Symbol # :all means "all" in that dimension; R uses missing argument. Bridge defines missing_arg(). return "missing_arg()" if arg == :all arg.to_s.gsub(/__/,".") when R::SymbolRef arg.to_r_symbol when String # If it's already a handle, don't quote it if arg.start_with?("g2_v") arg else "'#{arg.gsub("'", "\\\\'")}'" end when Numeric arg.to_s + (arg.is_a?(Integer) ? "L" : "") when TrueClass "TRUE" when FalseClass "FALSE" when Range final_value = (arg.exclude_end?) ? (arg.last - 1) : arg.last "seq(#{arg.first}, #{final_value})" when Proc, Method if R.bridge.respond_to?(:register_callback_proc_stub) return R.bridge.register_callback_proc_stub(arg) end id = R::Support.register_callback(arg) "function(...) { args <- list(...) handles <- character(0) if (length(args) > 0) { for (i in 1:length(args)) { h <- paste0('g2_v_cb_', i, '_', as.integer(runif(1, 1e8, 9e8))) assign(h, args[[i]], envir = .GlobalEnv) cls <- paste(class(args[[i]]), collapse=' ') handles <- c(handles, paste0(h, ':', cls)) } } cat('--G_CALLBACK--#{id}--', paste(handles, collapse='|'), '--\\n', sep='') flush.console() while(TRUE) { res_str <- readLines('/dev/shm/galaaz_callback_fifo', n=1) if (length(res_str) < 1L) next line <- res_str[1] if (startsWith(line, '--G_CMD--')) { # Extract sequence number if present (regmatches returns list; use [[1]] for sub) seq_match <- regmatches(line, regexpr('--G_CMD--seq=([0-9]+)--', line)) seq_num <- if (length(seq_match) > 0L && length(seq_match[[1]]) > 0L) sub('--G_CMD--seq=([0-9]+)--', '\\\\1', seq_match[[1]]) else '0' # Extract actual command cmd_part <- sub('--G_CMD--(seq=[0-9]+--)?', '', line) cmd <- trimws(cmd_part) # Restore newlines (Ruby sends U+E000 as placeholder so FIFO is one line) cmd <- gsub(\"#{TRANSPORT_NL}\", \"\\n\", cmd, fixed=TRUE) recv_log <- Sys.getenv('GALAAZ_R_RECEIVED_LOG', '') if (nchar(recv_log) > 0L) tryCatch({ write('---CMD---\\n', file=recv_log, append=TRUE) write(cmd, file=recv_log, append=TRUE) write('\\n', file=recv_log, append=TRUE) }, error=function(e) NULL) # Log that we're about to execute a command cat('[R_CALLBACK]', 'seq=', seq_num, 'Executing:', substr(cmd, 1, 50), '...\\n', sep='') # Wrap entire command handling in tryCatch to ensure --G_CMD_END-- is always sent # Use capture.output with explicit print() to ensure output is captured tryCatch({ if (nchar(cmd) > 0L) { # Evaluate in .GlobalEnv so g2_v* handles created by Ruby are visible. # Without this, eval() uses parent.frame() (chunk/engine env) and # object 'g2_vNNN' not found occurs when indexing vectors/matrices. result <- capture.output(print(eval(parse(text=cmd), envir = .GlobalEnv))) cat(result, sep='\\n') } }, error=function(e) { cat('--G_ERR--', conditionMessage(e), '\\n', sep='') tb <- paste(capture.output(traceback()), collapse = '\\\\\\\\n') if (nchar(tb) > 0L) cat('--G_TRACE--', tb, '\\n', sep='') }, finally={ # Include sequence number in response for synchronization cat('--G_CMD_END--seq=', seq_num, '--\\n', sep='') flush.console() }) } else if (startsWith(line, '--G_RET--')) { res_handle <- trimws(sub('--G_RET--', '', line)) res_handle <- gsub(\"#{TRANSPORT_NL}\", \"\\n\", res_handle, fixed=TRUE) if (nchar(res_handle) > 0L) return(eval(parse(text=res_handle), envir = .GlobalEnv)) return(invisible(NULL)) } } }" when nil "NULL" else handle = self.register_ruby_object(arg) "'#{handle}'" end end |
.process_missing(symbol, internal, *args) ⇒ Object
Entry point for method_missing: handle setters (x=), eval, or dispatch to R (function / field / method with receiver).
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# File 'lib/R_interface/rsupport.rb', line 452 def self.process_missing(symbol, internal, *args) name = self.convert_symbol2r(symbol) if ENV['GALAAZ_DEBUG_EVAL'] && name == "expr" && args.size >= 1 puts "[GALAAZ_DEBUG_EVAL] R.expr(...) called:" puts " args[0].class = #{args[0].class}, args[0].inspect = #{args[0].inspect}" end return process_missing_setter(name, internal, args) if name =~ /(.*)=$/ return process_missing_eval(name, internal, args) if name == "eval" # R.expr(expression_text): build R expression from string/SymbolExprString via parse(text=...), return R::Object. if name == "expr" && args.size == 1 arg = args[0] if arg.is_a?(SymbolExprString) || (arg.is_a?(String) && !arg.start_with?("g2_v")) str = arg.to_s var_name = self.generate_var_name R.bridge.eval_r("#{var_name} <- parse(text=#{str.inspect})[[1]]") return R::Object.build(var_name) end end process_missing_dispatch(name, internal, args) end |
.process_missing_dispatch(name, internal, args) ⇒ Object
Dispatch: R module (eval handle/namespace or exec_function) or R::Object (length / function / field / fallback).
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# File 'lib/R_interface/rsupport.rb', line 525 def self.process_missing_dispatch(name, internal, args) if internal == R && args.empty? && (name.include?("::") || name.start_with?("g2_v")) return R::Object.build(name) end # Phase 3: R.foo(...) — +internal+ is false/true from R.method_missing, not an R::Object. No per-handle # field vs function ambiguity; go straight to function execution. unless internal.is_a?(R::Object) return self.exec_function(name, *args) end handle = internal.r_interop return self.exec_function("length", internal, *args) if name == "length" # Prefer component/field access (obj.beta => obj[["beta"]]) over calling a global function (beta()). # Use [[ instead of $ so we avoid "$ operator is invalid for atomic vectors" when receiver is atomic; # [[ on list/data.frame/env returns the element; result protocol maps NA/NULL as appropriate. begin R.bridge.log_connections_in_r if ENV["GALAAZ_DEBUG_R"].to_s == "1" || ENV["GALAAZ_DEBUG_R"].to_s == "true" R.bridge.log_object_in_r(handle) if ENV["GALAAZ_DEBUG_R"].to_s == "1" || ENV["GALAAZ_DEBUG_R"].to_s == "true" || ENV["GALAAZ_DEBUG_OBJECT"].to_s == "1" || ENV["GALAAZ_DEBUG_OBJECT"].to_s == "true" rescue StandardError => e # Debug dump must not block the is_field check (e.g. if R throws "invalid connection" when inspecting the object). File.open(R.bridge.log_path("galaaz_obj_debug.log"), "a") { |f| f.puts "[#{Time.now.strftime('%H:%M:%S.%L')}] log_object_in_r(#{handle}) failed: #{e.}" } end # In callback, eval_r can fail with "invalid connection" - wrap in begin/rescue is_field = false is_func = false if R.bridge.respond_to?(:dispatch_probe) # Environments are mutable (rm, assign); do not cache probe results — stale is_field breaks semantics. cache_probe = !internal.is_a?(::R::Environment) probe_key = dispatch_probe_cache_key(handle, name) cached_probe = nil if cache_probe @dispatch_probe_cache_mx.synchronize do cached_probe = @dispatch_probe_handle_cache[probe_key] @dispatch_probe_cache_hits += 1 if cached_probe end end if cached_probe is_field = !!cached_probe[:is_field] is_func = !!cached_probe[:is_func] else begin probe = R.bridge.dispatch_probe(handle, name) is_field = !!probe[:is_field] is_func = !!probe[:is_func] if cache_probe @dispatch_probe_cache_mx.synchronize do @dispatch_probe_cache_misses += 1 end store_dispatch_probe_handle_cache(probe_key, is_field, is_func) end @dispatch_probe_cache[:func][name] = is_func rescue StandardError => e raise unless e..include?("invalid connection") || e..include?("invalid dispatch_probe params") is_field = false is_func = false end end else is_field = begin R.bridge.eval_r("isTRUE('#{name}' %in% names(#{handle})) || (is.environment(#{handle}) && isTRUE(exists('#{name}', envir = #{handle}, inherits = FALSE)))") == "[1] TRUE" rescue RuntimeError => e e..include?("invalid connection") ? false : raise end if is_field res = self.exec_function_name("`[[`", internal, name) return res.call(*args) if !args.empty? && res.respond_to?(:call) return res end is_func = begin cached = @dispatch_probe_cache[:func][name] if cached.nil? cached = (R.bridge.eval_r("is.function(try(get('#{name}'), silent=TRUE))") == "[1] TRUE") @dispatch_probe_cache[:func][name] = cached end cached rescue RuntimeError => e e..include?("invalid connection") ? false : raise end end if is_field res = self.exec_function_name("`[[`", internal, name) return res.call(*args) if !args.empty? && res.respond_to?(:call) return res end return self.exec_function(name, internal, *args) if is_func # Environment: missing name should raise NoMethodError (like Ruby), not call name(env) in R. if internal.is_a?(::R::Environment) ::Kernel.raise(::NoMethodError, "undefined method `#{name}' for #{internal.inspect}") end self.exec_function(name, internal, *args) end |
.process_missing_eval(name, internal, args) ⇒ Object
Handle obj.eval(env) or R.eval(code): expression in context, or single-arg R.eval.
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# File 'lib/R_interface/rsupport.rb', line 492 def self.process_missing_eval(name, internal, args) if internal.is_a?(R::Object) && name == "eval" && args.empty? return self.exec_function("eval", internal) end if internal.is_a?(R::Object) && args.size >= 1 expr = self.parse_arg(internal) env = self.parse_arg(args[0]) unless expr.start_with?("g2_v") || expr.start_with?("quote(") puts "DEBUG: Quoting expression: #{expr}" if ENV['GALAAZ_DEBUG'] expr = "quote(#{expr})" end var_name = self.generate_var_name r_code = "#{var_name} <- eval(#{expr}, #{env})" if ENV['GALAAZ_DEBUG_EVAL'] puts "[GALAAZ_DEBUG_EVAL] expr.eval(env) path:" puts " internal.class = #{internal.class}" puts " internal.r_interop = #{internal.r_interop.inspect}" if internal.respond_to?(:r_interop) puts " internal.expression = #{internal.expression.inspect}" if internal.respond_to?(:expression) puts " parse_arg(internal) => expr = #{expr.inspect}" puts " parse_arg(args[0]) => env = #{env.inspect}" puts " R code sent: #{r_code}" end R.bridge.eval_r(r_code) return R::Object.build(var_name) end if args.size == 1 expr_arg = args[0].is_a?(SymbolExprString) ? args[0].to_s : args[0] return self.eval(expr_arg) end self.exec_function(name, *args) end |
.process_missing_setter(name, internal, args) ⇒ Object
Handle obj.var = rhs or R.var = rhs: use var<- or $<- on R::Object, else .GlobalEnv assignment.
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# File 'lib/R_interface/rsupport.rb', line 474 def self.process_missing_setter(name, internal, args) var = name[/^(.*)=$/, 1] rhs = self.parse_arg(args[0]) if internal.is_a?(R::Object) handle = internal.r_interop r_var = (var == "rclass") ? "class" : var R.bridge.eval_r(<<~RCODE) #{handle} <- tryCatch( `#{r_var}<-`(#{handle}, #{rhs}), error = function(e) `$<-`(#{handle}, '#{var}', #{rhs}) ) RCODE else R.bridge.eval_r(".GlobalEnv$#{var} <- #{rhs}") end end |
.range ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 63 def self.range "range_helper" end |
.register_callback(proc) ⇒ Object
Register a Proc/Method to be invoked from R (e.g. in outer()); returns callback id for the R stub.
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# File 'lib/R_interface/rsupport.rb', line 638 def self.register_callback(proc) @ruby_obj_id += 1 id = @ruby_obj_id @callbacks[id] = proc id end |
.register_ruby_object(obj) ⇒ Object
Store a Ruby object for passing to R; returns handle string "rb_obj_
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# File 'lib/R_interface/rsupport.rb', line 630 def self.register_ruby_object(obj) @ruby_object_id += 1 id = @ruby_object_id @ruby_objects[id] = obj "rb_obj_#{id}" end |
.reset_dispatch_probe_cache_stats! ⇒ Object
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# File 'lib/R_interface/rsupport.rb', line 46 def self.reset_dispatch_probe_cache_stats! @dispatch_probe_cache_mx&.synchronize do @dispatch_probe_cache_hits = 0 @dispatch_probe_cache_misses = 0 end end |
.ruby_callback_method ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 55 def self.ruby_callback_method "ruby_callback_method" end |
.ruby_result_from_envelope(envelope, var_name, r_expr) ⇒ Object
Build the same Ruby value as exec_function from a legacy envelope (+:handle+, scalars, rb_obj_*).
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# File 'lib/R_interface/rsupport.rb', line 371 def self.ruby_result_from_envelope(envelope, var_name, r_expr) case envelope[:type] when :scalar_double, :scalar_integer, :scalar_logical, :scalar_character val = envelope[:value] if envelope[:type] == :scalar_character && val.is_a?(String) && val =~ /^rb_obj_\d+$/ return get_ruby_object(val) end r_class = { scalar_double: "numeric", scalar_integer: "integer", scalar_logical: "logical", scalar_character: "character" }[envelope[:type]] return R::Object.build(var_name, r_expr, r_class: r_class) when :scalar_symbol sym_name = envelope[:value].to_s return sym_name.gsub("::", "___").gsub(".", "__").to_sym when :handle return R::Object.build(envelope[:handle], r_expr, r_class: envelope[:r_class], wrapper_tag: envelope[:wrapper_tag]) else raise "Result protocol: unknown envelope type #{envelope[:type].inspect}" end end |
.start_capture ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 39 def self.start_capture "start_capture" end |
.stop_capture ⇒ Object
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# File 'lib/R_interface/r_methods.rb', line 43 def self.stop_capture "stop_capture" end |
.store_dispatch_probe_handle_cache(key, is_field, is_func) ⇒ Object
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# File 'lib/R_interface/rsupport.rb', line 68 def self.store_dispatch_probe_handle_cache(key, is_field, is_func) @dispatch_probe_cache_mx.synchronize do if @dispatch_probe_handle_cache.key?(key) @dispatch_probe_handle_cache[key] = { is_field: is_field, is_func: is_func } return end while @dispatch_probe_handle_cache.size >= DISPATCH_PROBE_CACHE_MAX && !@dispatch_probe_handle_fifo.empty? oldest = @dispatch_probe_handle_fifo.shift @dispatch_probe_handle_cache.delete(oldest) if oldest end @dispatch_probe_handle_cache[key] = { is_field: is_field, is_func: is_func } @dispatch_probe_handle_fifo << key end end |