Module: Chemicalml::Cml::Base::BondArray

Included in:
Schema24::BondArray, Schema3::BondArray
Defined in:
lib/chemicalml/cml/base/bond_array.rb

Overview

Container for a list of bonds. Two equivalent serialisations:

<bondArray><bond atomRefs2="a1 a2" order="1"/></bondArray>

The parallel-array form uses the wire attribute names atomRef1, atomRef2, bondID, order — the XSD attribute group is named atomRef1Array etc., but the wire attribute is atomRef1.

Class Method Summary collapse

Class Method Details

.included(klass) ⇒ Object 



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# File 'lib/chemicalml/cml/base/bond_array.rb', line 17

def self.included(klass)
  klass.class_eval do
    include Chemicalml::Cml::Role::BondArray

    attribute :bonds, :bond, collection: true

    attribute :title, :string
    attribute :id, :string
    attribute :convention, :string
    attribute :dict_ref, :string

    attribute :bond_id_array, :string
    attribute :atom_ref1_array, :string
    attribute :atom_ref2_array, :string
    attribute :order_array, :string
    xml do
      namespace Chemicalml::Cml::Namespace
      root 'bondArray'
      map_element 'bond', to: :bonds
      map_attribute 'title', to: :title
      map_attribute 'id', to: :id
      map_attribute 'convention', to: :convention
      map_attribute 'dictRef', to: :dict_ref
      map_attribute 'bondID', to: :bond_id_array
      map_attribute 'atomRef1', to: :atom_ref1_array
      map_attribute 'atomRef2', to: :atom_ref2_array
      map_attribute 'order', to: :order_array
    end
    key_value do
      map 'bond', to: :bonds
      map 'title', to: :title
      map 'id', to: :id
      map 'convention', to: :convention
      map 'dictRef', to: :dict_ref
      map 'bondID', to: :bond_id_array
      map 'atomRef1', to: :atom_ref1_array
      map 'atomRef2', to: :atom_ref2_array
      map 'order', to: :order_array
    end
  end
end