Module: CancerRegistryReportingTestKit::ValidationTest

Included in:
HDEAV100::AllergyIntoleranceValidationTest, HDEAV100::AuthorValidationTest, HDEAV100::CarePlanValidationTest, HDEAV100::CcrrContentBundleParseAndValidationTest, HDEAV100::CentralCancerRegistryPrimaryCancerConditionValidationTest, HDEAV100::CompositionValidationTest, HDEAV100::ConditionValidationTest, HDEAV100::DiagnosticReportLabValidationTest, HDEAV100::DiagnosticReportNoteValidationTest, HDEAV100::DocumentReferenceValidationTest, HDEAV100::EncounterValidationTest, HDEAV100::McodeRadiotherapyCourseSummaryValidationTest, HDEAV100::McodeSecondaryCancerConditionValidationTest, HDEAV100::McodeTnmStageGroupValidationTest, HDEAV100::MedicationAdministrationValidationTest, HDEAV100::MedicationRequestValidationTest, HDEAV100::MedicationStatementValidationTest, HDEAV100::MedicationValidationTest, HDEAV100::ObservationLabValidationTest, HDEAV100::ObservationValidationTest, HDEAV100::OdhUsualWorkValidationTest, HDEAV100::OrganizationValidationTest, HDEAV100::PatientValidationTest, HDEAV100::PractitionerRoleValidationTest, HDEAV100::PractitionerValidationTest, HDEAV100::ProcedureValidationTest, HDEAV100::ServiceRequestValidationTest, HDEAV100::SmokingstatusValidationTest, MedicationAdministrationValidationTest, MedicationRequestValidationTest, PrimaryCancerConditionValidationTest, RadiotherapyProcedureValidationTest, SecondaryCancerConditionValidationTest, TNMDistantMetastasesCategoryValidationTest, TNMPrimaryTumorCategoryValidationTest, TNMRegionalNodesCategoryValidationTest, TNMStageGroupValidationTest
Defined in:
lib/cancer_registry_reporting_test_kit/validation_test.rb

Constant Summary collapse

DAR_CODE_SYSTEM_URL = 
'http://terminology.hl7.org/CodeSystem/data-absent-reason'
DAR_EXTENSION_URL = 
'http://hl7.org/fhir/StructureDefinition/data-absent-reason'

Instance Method Summary collapse

Instance Method Details

#check_for_dar(resource) ⇒ Object 



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# File 'lib/cancer_registry_reporting_test_kit/validation_test.rb', line 40

def check_for_dar(resource)
  unless scratch[:dar_code_found]
    resource.each_element do |element, _meta, _path|
      next unless element.is_a?(FHIR::Coding)

      check_for_dar_code(element)
    end
  end

  return if scratch[:dar_extension_found]

  check_for_dar_extension(resource)
end

#check_for_dar_code(coding) ⇒ Object 



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# File 'lib/cancer_registry_reporting_test_kit/validation_test.rb', line 54

def check_for_dar_code(coding)
  return unless coding.code == 'unknown' && coding.system == DAR_CODE_SYSTEM_URL

  scratch[:dar_code_found] = true
  output dar_code_found: 'true'
end

#check_for_dar_extension(resource) ⇒ Object 



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# File 'lib/cancer_registry_reporting_test_kit/validation_test.rb', line 61

def check_for_dar_extension(resource)
  return unless resource.source_contents&.include? DAR_EXTENSION_URL

  scratch[:dar_extension_found] = true
  output dar_extension_found: 'true'
end

#find_validation_errors(resourceType = resource_type, resources, profile_url, profile_version, skip_if_empty: true) ⇒ Object 



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# File 'lib/cancer_registry_reporting_test_kit/validation_test.rb', line 20

def find_validation_errors(resourceType = resource_type,
                      resources,
                      profile_url,
                      profile_version,
                      skip_if_empty: true)
  skip_if skip_if_empty && resources.blank?,
          "No #{resourceType} resources conforming to the #{profile_url} profile were returned"

  omit_if resources.blank?,
          "No #{resourceType} resources provided so the #{profile_url} profile does not apply"

  profile_with_version = "#{profile_url}|#{profile_version}"
  resources.each do |resource|
    resource_is_valid?(resource: resource, profile_url: profile_with_version)
    # DAR checks are a SHOULD requirement in CCRR 1.0.1
    # check_for_dar(resource)
  end
end

#perform_validation_test(resourceType = resource_type, resources, profile_url, profile_version, skip_if_empty: true) ⇒ Object 



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# File 'lib/cancer_registry_reporting_test_kit/validation_test.rb', line 8

def perform_validation_test(resourceType = resource_type,
                            resources,
                            profile_url,
                            profile_version,
                            skip_if_empty: true)
  find_validation_errors(resourceType, resources, profile_url, profile_version, skip_if_empty: )
  errors_found = messages.any? { |message| message[:type] == 'error' }

  profile_with_version = "#{profile_url}|#{profile_version}"
  assert !errors_found, "Resource does not conform to the profile #{profile_with_version}"
end